Selected Publications

Shao, W., Kearney. M., Maldarelli, F., Mellors, J.W., Stephens, R.M., Lifson, J.D., KewalRamani, V.N., Ambrose, Z., Coffin, J.M., and Palmer, S.E.  (2009)  RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy.  Retrovirology, in press.

Dinoso, J.B., Kim, S.Y., Wiegand, A.M., Palmer, S.E., Gange, S.J., Cranmer, L., O'Shea, A., Callender, M., Spivak, A., Brennan, T., Kearney, M.F., Proschan, M.A., Mican, J.M., Rehm, C.A., Coffin, J.M., Mellors, J.W., Siliciano, R.F., and Maldarelli, F.  (2009)  Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy.  Proc. Natl. Acad. Sci. USA 106: 9403-9408.
[Abstract]     [Full-text PDF article - 987 K]
[PNAS online supporting information related to this article - 176 K PDF]

Kearney, M., Maldarelli, F., Shao, W., Margolick, J.B., Daar, E.S., Mellors, J.W., Rao, V., Coffin, J.M., and Palmer, S.  (2009)  Human immunodeficiency virus type 1 population genetics and adaptation in newly infected individuals.  J. Virol. 83: 2715-2727.
[Abstract]     [Full-text PDF article - 3286 K]

Kearney, M., Palmer, S., Maldarelli, F., Shao, W., Polis, M.A., Mican, J., Rock-Kress, D., Margolick, J.B., Coffin, J.M., and Mellors, J.W.  (2008)  Frequent polymorphism at drug resistance sites in HIV-1 protease and reverse transcriptase.  AIDS 22: 497-501.
[Abstract]     [Full-text PDF article]

Ambrose, Z., Palmer, S., Boltz, V.F., Kearney, M., Larsen, K., Polacino, P., Flanary, L., Oswald, K., Piatak, M., Jr., Smedley, J., Shao, W., Bischofberger, N., Maldarelli, F., Kimata, J.T., Mellors, J.W., Hu, S.-L., Coffin, J.M., Lifson, J.D., and KewalRamani, V.N.  (2007)  Suppression of viremia and evolution of human immunodeficiency virus type 1 drug resistance in a macaque model for antiretroviral therapy.  J. Virol. 81: 12145-12155.
[Abstract]     [Full-text PDF article]

Halvas, E.K., Aldrovandi, G.M., Balfe, P., Beck, I.A., Boltz, V.F., Coffin, J.M., Frenkel, L.M., Hazelwood, J.D., Johnson, V.A., Kearney, M., Kovacs, A., Kuritzkes, D.R., Metzner, K.J., Nissley, D.V., Nowicki, M., Palmer, S., Ziermann, R., Zhao, R.Y., Jennings, C.L., Bremer, J., Brambilla, D., and Mellors, J.W.  (2006)  Blinded, multicenter comparison of methods to detect a drug-resistant mutant of human immunodeficiency virus type 1 at low frequency.   J. Clin. Microbiol. 44: 2612-2614.     [Abstract]      [Full-text PDF article]

Palmer, S., Boltz, V., Maldarelli, F., Kearney, M., Halvas, E.K., Rock, D., Falloon, J., Davey, R.T., Jr., Dewar, R.L., Metcalf, J.A., Mellors, J.W., and Coffin, J.M.  (2006)  Selection and persistence of non-nucleoside reverse transcriptase inhibitor-resistant HIV-1 in patients starting and stopping non-nucleoside therapy.  AIDS 20: 701-710.
[Abstract]     [Full-text PDF article]

Palmer, S., Kearney, M., Maldarelli, F., Halvas, E.K., Bixby, C.J., Bazmi, H., Rock, D., Falloon, J., Davey, R.T., Jr., Dewar, R.L., Metcalf, J.A., Hammer, S., Mellors, J.W., and Coffin, J.M.  (2005)  Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis.  J. Clin. Microbiol. 43: 406-413.      [Abstract]     [Full-text PDF article]

Achaz, G., Palmer, S., Kearney, M., Maldarelli, F., Mellors, J.W., Coffin, J.M., and Wakeley, J.  (2004)  A robust measure of HIV-1 population turnover within chronically infected individuals.  Mol. Biol. Evol. 21: 1902-1912.     [Abstract]     [Full-text PDF article]

Yu, Q., Konig, R., Pillai, S., Chiles, K., Kearney, M., Palmer, S., Richman, D., Coffin, J.M., and Landau, N.R.  (2004)  Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome.  Nat. Struct. Mol. Biol. 11: 435-442.
[Abstract]     [Full-text PDF article]

Last modified: 30 October 2009