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... The following are publications on retroviral vectors by the Hughes laboratory:
1:   Hu J, Renaud G, Golmes T, Ferris A, Hendrie PC, Donahue RE, Hughes SH,
Wolfsberg TG, Russell DW, Dunbar CE.
Related Articles
Reduced genotoxicity of avian sarcoma leukosis virus vectors in rhesus
long-term repopulating cells compared to standard murine retrovirus vectors.
Mol Ther. 2008 Jun 24. [Epub ahead of print]
PMID: 18578011 [PubMed - as supplied by publisher]
2:   Chang KW, Oh J, Alvord WG, Hughes SH.Related Articles
The effects of alternate polypurine tracts (PPTs) and mutations of sequences
adjacent to the PPT on viral replication and cleavage specificity of the Rous
sarcoma virus reverse transcriptase.

J Virol. 2008 Jun 18. [Epub ahead of print]
PMID: 18562520 [PubMed - as supplied by publisher]
3:   McWilliams MJ, Julias JG, Hughes SH.Related Articles
Mutations in the human immunodeficiency virus type 1 polypurine tract (PPT)
reduce the rate of PPT cleavage and plus-strand DNA synthesis.
J Virol. 2008 May;82(10):5104-8.
PMID: 18321979 [PubMed - indexed for MEDLINE]
4:   Oh J, McWilliams MJ, Julias JG, Hughes SH.Related Articles
Mutations in the U5 region adjacent to the primer binding site affect tRNA
cleavage by human immunodeficiency virus type 1 reverse transcriptase in vivo.
J Virol. 2008 Jan;82(2):719-27.
PMID: 17989171 [PubMed - indexed for MEDLINE]
5:  Oh J, Chang KW, Wierzchoslawski R, Alvord WG, Hughes SH.Related Articles
Rous sarcoma virus (RSV) integration in vivo: a CA dinucleotide is not required
in U3, and RSV linear DNA does not autointegrate.
J Virol. 2008 Jan;82(1):503-12.
PMID: 17959663 [PubMed - indexed for MEDLINE]
6:  Hu J, Ferris A, Larochelle A, Krouse AE, Metzger ME, Donahue RE, Hughes SH,
Dunbar CE.
Related Articles
Transduction of rhesus macaque hematopoietic stem and progenitor cells with
avian sarcoma and leukosis virus vectors.
Hum Gene Ther. 2007 Aug;18(8):691-700.
PMID: 17655493 [PubMed - indexed for MEDLINE]
7:  Mulky A, Vu BC, Conway JA, Hughes SH, Kappes JC.Related Articles
Analysis of amino acids in the beta7-beta8 loop of human immunodeficiency
virus type 1 reverse transcriptase for their role in virus replication.
J Mol Biol. 2007 Feb 2;365(5):1368-78.
PMID: 17141805 [PubMed - indexed for MEDLINE]
8:  Oh J, Chang KW, Alvord WG, Hughes SH.Related Articles
Alternate polypurine tracts affect rous sarcoma virus integration in vivo.
J Virol. 2006 Oct;80(20):10281-4.
PMID: 17005708 [PubMed - indexed for MEDLINE]
9:  McWilliams MJ, Julias JG, Sarafianos SG, Alvord WG, Arnold E, Hughes SH.Related Articles
Combining mutations in HIV-1 reverse transcriptase with mutations in the
HIV-1 polypurine tract affects RNase H cleavages involved in PPT utilization.
Virology. 2006 May 10;348(2):378-88.
PMID: 16473384 [PubMed - indexed for MEDLINE]
10 Oh J, Chang KW, Hughes SH.Related Articles
Mutations in the U5 sequences adjacent to the primer binding site do not
affect tRNA cleavage by rous sarcoma virus RNase H but do cause aberrant
integrations in vivo.
J Virol. 2006 Jan;80(1):451-9.
PMID: 16352569 [PubMed - indexed for MEDLINE]
11:  Jones FD, Hughes SH.Related Articles
In vitro analysis of the effects of mutations in the G-tract of the human
immunodeficiency virus type 1 polypurine tract on RNase H cleavage specificity.
Virology. 2007 Apr 10;360(2):341-9.
PMID: 17123564 [PubMed - indexed for MEDLINE]
12:  Chang KW, Julias JG, Alvord WG, Oh J, Hughes SH.Related Articles
Alternate polypurine tracts (PPTs) affect the rous sarcoma virus RNase H
cleavage specificity and reveal a preferential cleavage following a GA
dinucleotide sequence at the PPT-U3 junction.
J Virol. 2005 Nov;79(21):13694-704.
PMID: 16227289 [PubMed - indexed for MEDLINE]
13:  Chang KW, Barsov EV, Ferris AL, Hughes SH.Related Articles
Mutations of a residue within the polyproline-rich region of Env alter the
replication rate and level of cytopathic effects in chimeric avian retroviral vectors.
J Virol. 2005 Aug;79(16):10258-67.
PMID: 16051819 [PubMed - indexed for MEDLINE]
14:  Julias JG, McWilliams MJ, Sarafianos SG, Alvord WG, Arnold E, Hughes SH.Related Articles
Effects of mutations in the G tract of the human immunodeficiency virus
type 1 polypurine tract on virus replication and RNase H cleavage.
J Virol. 2004 Dec;78(23):13315-24.
PMID: 15542682 [PubMed - indexed for MEDLINE]
15:  Hughes SH.Related Articles
The RCAS vector system.
Folia Biol (Praha). 2004;50(3-4):107-19. Review. No abstract available.
PMID: 15373344 [PubMed - indexed for MEDLINE]
16:  Kvaratskhelia M, Clark PK, Hess S, Melder DC, Federspiel MJ, Hughes SH.Related Articles
Identification of glycosylation sites in the SU component of the avian
sarcoma/leukosis virus envelope glycoprotein (subgroup A) by mass spectrometry.
Virology. 2004 Aug 15;326(1):171-81.
PMID: 15262505 [PubMed - indexed for MEDLINE]
17:  Julias JG, Boyer PL, McWilliams MJ, Alvord WG, Hughes SH.Related Articles
Mutations at position 184 of human immunodeficiency virus type-1 reverse
transcriptase affect virus titer and viral DNA synthesis.
Virology. 2004 Apr 25;322(1):13-21.
PMID: 15063112 [PubMed - indexed for MEDLINE]
18:  McWilliams MJ, Julias JG, Sarafianos SG, Alvord WG, Arnold E, Hughes SH.Related Articles
Mutations in the 5' end of the human immunodeficiency virus type 1
polypurine tract affect RNase H cleavage specificity and virus titer.
J Virol. 2003 Oct;77(20):11150-7.
PMID: 14512562 [PubMed - indexed for MEDLINE]
19:  Julias JG, McWilliams MJ, Sarafianos SG, Alvord WG, Arnold E, Hughes SH.Related Articles
Mutation of amino acids in the connection domain of human immunodeficiency virus
type 1 reverse transcriptase that contact the template-primer affects RNase H activity.
J Virol. 2003 Aug;77(15):8548-54.
PMID: 12857924 [PubMed - indexed for MEDLINE]
20:  Julias JG, McWilliams MJ, Sarafianos SG, Arnold E, Hughes SH.Related Articles
Mutations in the RNase H domain of HIV-1 reverse transcriptase affect the
initiation of DNA synthesis and the specificity of RNase H cleavage in vivo.
Proc Natl Acad Sci U S A. 2002 Jul 9;99(14):9515-20.
PMID: 12093908 [PubMed - indexed for MEDLINE]
21:   Oh J, Julias JG, Ferris AL, Hughes SH.Related Articles
Construction and characterization of a replication-competent retroviral
shuttle vector plasmid.

J Virol. 2002 Feb;76(4):1762-1768.
PMID: 11799171 [PubMed - as supplied by publisher]
22:   Barsov EV, Payne WS, Hughes SH.Related Articles
Adaptation of chimeric retroviruses in vitro and in vivo: Isolation of avian
retroviral vectors with extended host range.

J Virol. 2001 Jun 1;75(11):4973-4983.
PMID: 11333876 [PubMed - as supplied by publisher]
23:   Pinto VB, Prasad S, Yewdell J, Bennink J, Hughes SH.Related Articles
Restricting expression prolongs expression of foreign genes introduced into
animals by retroviruses.
J Virol. 2000 Nov;74(21):10202-6.
PMID: 11024149 [PubMed - indexed for MEDLINE]
24:   Holmen SL, Salter DW, Payne WS, Dodgson JB, Hughes SH, Federspiel MJ.Related Articles
Soluble forms of the subgroup A avian leukosis virus [ALV(A)] receptor Tva
significantly inhibit ALV(A) infection in vitro and in vivo.
J Virol. 1999 Dec;73(12):10051-60.
PMID: 10559319 [PubMed - indexed for MEDLINE]
25:  Ortiz-Conde BA, Hughes SH.Related Articles
Studies of the genomic RNA of leukosis viruses: implications for RNA dimerization.
J Virol. 1999 Sep;73(9):7165-74.
PMID: 10438803 [PubMed - indexed for MEDLINE]
26:  Zheng XH, Hughes SH.Related Articles
An avian sarcoma/leukosis virus-based gene trap vector for mammalian cells.
J Virol. 1999 Aug;73(8):6946-52.
PMID: 10400793 [PubMed - indexed for MEDLINE]
27:  Schaefer-Klein J, Givol I, Barsov EV, Whitcomb JM, VanBrocklin M, Foster DN, Federspiel MJ, Hughes SH.Related Articles
The EV-O-derived cell line DF-1 supports the efficient replication of
avian leukosis-sarcoma viruses and vectors.
Virology. 1998 Sep 1;248(2):305-11.
PMID: 9721239 [PubMed - indexed for MEDLINE]
28:  Givol I, Givol D, Hughes SH.Related Articles
Overexpression of p21waf1/cip1 arrests the growth of chicken embryo
fibroblasts that overexpress E2F1.
Oncogene. 1998 Jun 18;16(24):3115-22.
PMID: 9671390 [PubMed - indexed for MEDLINE]
29:  Federspiel MJ, Hughes SH.Related Articles
Retroviral gene delivery.
Methods Cell Biol. 1997;52:179-214. Review. No abstract available.
PMID: 9379950 [PubMed - indexed for MEDLINE]
30 Fu W, Ortiz-Conde BA, Gorelick RJ, Hughes SH, Rein A.Related Articles
Placement of tRNA primer on the primer-binding site requires pol gene
expression in avian but not murine retroviruses.
J Virol. 1997 Sep;71(9):6940-6.
PMID: 9261422 [PubMed - indexed for MEDLINE]
31:  VanBrocklin M, Ferris AL, Hughes SH, Federspiel MJ.Related Articles
Expression of a murine leukemia virus Gag-Escherichia coli RNase HI
fusion polyprotein significantly inhibits virus spread.
J Virol. 1997 Apr;71(4):3312-8.
PMID: 9060701 [PubMed - indexed for MEDLINE]
32:  Petropoulos CJ, Givol I, Hughes SH.Related Articles
Comparative analysis of the structure and function of the chicken c-myc
and v-myc genes: v-myc is a more potent inducer of cell proliferation and
apoptosis than c-myc.
Oncogene. 1996 Jun 20;12(12):2611-21.
PMID: 8700520 [PubMed - indexed for MEDLINE]
33:  Barsov EV, Hughes SH.Related Articles
Gene transfer into mammalian cells by a Rous sarcoma virus-based retroviral
vector with the host range of the amphotropic murine leukemia virus.
J Virol. 1996 Jun;70(6):3922-9.
PMID: 8648729 [PubMed - indexed for MEDLINE]
34:  Federspiel MJ, Swing DA, Eagleson B, Reid SW, Hughes SH.Related Articles
Expression of transduced genes in mice generated by infecting blastocysts
with avian leukosis virus-based retroviral vectors.
Proc Natl Acad Sci U S A. 1996 May 14;93(10):4931-6.
PMID: 8643506 [PubMed - indexed for MEDLINE]
35:  Givol I, Givol D, Rulong S, Resau J, Tsarfaty I, Hughes SH.Related Articles
Overexpression of human p21waf1/cip1 arrests the growth of chicken embryo
fibroblasts transformed by individual oncogenes.
Oncogene. 1995 Dec 21;11(12):2609-18.
PMID: 8545118 [PubMed - indexed for MEDLINE]
36:  Nasioulas G, Hughes SH, Felber BK, Whitcomb JM.Related Articles
Production of avian leukosis virus particles in mammalian cells can be mediated
by the interaction of the human immunodeficiency virus protein Rev and the
Rev-responsive element.
Proc Natl Acad Sci U S A. 1995 Dec 5;92(25):11940-4.
PMID: 8524879 [PubMed - indexed for MEDLINE]
37:  Whitcomb JM, Ortiz-Conde BA, Hughes SH.Related Articles
Replication of avian leukosis viruses with mutations at the primer binding site:
use of alternative tRNAs as primers.
J Virol. 1995 Oct;69(10):6228-38.
PMID: 7545245 [PubMed - indexed for MEDLINE]
38:  Natsoulis G, Seshaiah P, Federspiel MJ, Rein A, Hughes SH, Boeke JD.Related Articles
Targeting of a nuclease to murine leukemia virus capsids inhibits viral multiplication.
Proc Natl Acad Sci U S A. 1995 Jan 17;92(2):364-8.
PMID: 7831291 [PubMed - indexed for MEDLINE]
39:  Federspiel MJ, Bates P, Young JA, Varmus HE, Hughes SH.Related Articles
A system for tissue-specific gene targeting: transgenic mice susceptible to
subgroup A avian leukosis virus-based retroviral vectors.
Proc Natl Acad Sci U S A. 1994 Nov 8;91(23):11241-5.
PMID: 7972042 [PubMed - indexed for MEDLINE]
40:  Federspiel MJ, Hughes SH.Related Articles, Protein
Effects of the gag region on genome stability: avian retroviral vectors
that contain sequences from the Bryan strain of Rous sarcoma virus.
Virology. 1994 Sep;203(2):211-20.
PMID: 8053145 [PubMed - indexed for MEDLINE]
41:  Givol I, Tsarfaty I, Resau J, Rulong S, da Silva PP, Nasioulas G, DuHadaway J,
Hughes SH, Ewert DL.
Related Articles
Bcl-2 expressed using a retroviral vector is localized primarily in the nuclear
membrane and the endoplasmic reticulum of chicken embryo fibroblasts.
Cell Growth Differ. 1994 Apr;5(4):419-29.
PMID: 8043516 [PubMed - indexed for MEDLINE]
42:  Boerkoel CF, Federspiel MJ, Salter DW, Payne W, Crittenden LB, Kung HJ,
Hughes SH.
Related Articles
A new defective retroviral vector system based on the Bryan strain of Rous
sarcoma virus.
Virology. 1993 Aug;195(2):669-79.
PMID: 8393241 [PubMed - indexed for MEDLINE]
43 Salter DW, Payne WS, Crittenden LB, Federspiel MJ, Petropoulos CJ, Bradac JA,
Hughes SH.
Avian leukosis retroviruses and gene transfer into the avian genome.
In Manipulation of the Avian Genome (RJ Etches and AM Verrinder Gibbins, eds),
CRC Press, pp. 135-150, 1993.
44:  Frew T, Whitaker B, Salter D, Payne W, Hughes S, Yamamoto H, Takeuchi T, Brumbaugh J.Related Articles
The expression of mouse tyrosinase in chick cells in vitro and in vivo when
controlled by a constitutive promoter.
Pigment Cell Res. 1992 Nov;5(5 Pt 2):312-21.
PMID: 1292014 [PubMed - indexed for MEDLINE]
45:  Petropoulos CJ, Payne W, Salter DW, Hughes SH.Related Articles
Appropriate in vivo expression of a muscle-specific promoter by using avian
retroviral vectors for gene transfer [corrected]
J Virol. 1992 Jun;66(6):3391-7.
PMID: 1637416 [PubMed - indexed for MEDLINE]
46:  Givol I, Greenhouse JJ, Hughes SH, Ewert DL.Related Articles
Retroviruses that express different ras mutants cause different types of
tumors in chickens.
Oncogene. 1992 Jan;7(1):141-6.
PMID: 1632878 [PubMed - indexed for MEDLINE]
47:  Colmenares C, Sutrave P, Hughes SH, Stavnezer E.Related Articles
Activation of the c-ski oncogene by overexpression.
J Virol. 1991 Sep;65(9):4929-35.
PMID: 1870207 [PubMed - indexed for MEDLINE]
48:  Petropoulos CJ, Hughes SH.Related Articles
Replication-competent retrovirus vectors for the transfer and expression of
gene cassettes in avian cells.
J Virol. 1991 Jul;65(7):3728-37.
PMID: 2041092 [PubMed - indexed for MEDLINE]
49:  Federspiel MJ, Crittenden LB, Provencher LP, Hughes SH.Related Articles
Experimentally introduced defective endogenous proviruses are highly
expressed in chickens.
J Virol. 1991 Jan;65(1):313-9.
PMID: 1845892 [PubMed - indexed for MEDLINE]
50:   Hughes SH.
Will retroviral vectors be used to make transgenic livestock?
AgBiotech News Infor. 1991 3:25-8.
51:  Hughes SH, Petropoulos CJ, Federspiel MJ, Sutrave P, Forry-Schaudies S,
Bradac JA.
Related Articles
Vectors and genes for improvement of animal strains.
J Reprod Fertil Suppl. 1990;41:39-49. Review.
PMID: 2213714 [PubMed - indexed for MEDLINE]
52:  Frew TJ, Whitaker BA, Greenhouse JJ, Hughes SH, Yamamoto H, Takeuchi T, Brumbaugh JA.Related Articles
Expression of virally-transduced mouse tyrosinase in cultured chick embryo cells.
SAAS Bull Biochem Biotechnol. 1990 Jan;3:112-7.
PMID: 1369250 [PubMed - indexed for MEDLINE]
53:  Whitaker BA, Frew TJ, Greenhouse JJ, Hughes SH, Yamamoto H, Takeuchi T, Brumbaugh JA.Related Articles
Expression of virally transduced mouse tyrosinase in tyrosinase-negative chick
embryo melanocytes in culture.
Pigment Cell Res. 1989 Nov-Dec;2(6):524-7.
PMID: 2557608 [PubMed - indexed for MEDLINE]
54:  Greenhouse JJ, Petropoulos CJ, Crittenden LB, Hughes SH.Related Articles
Helper-independent retrovirus vectors with Rous-associated virus type O
long terminal repeats.
J Virol. 1988 Dec;62(12):4809-12.
PMID: 2460645 [PubMed - indexed for MEDLINE]
55:  Hughes SH, Greenhouse JJ, Petropoulos CJ, Sutrave P.Related Articles, Protein, Nucleotide
Adaptor plasmids simplify the insertion of foreign DNA into
helper-independent retroviral vectors.
J Virol. 1987 Oct;61(10):3004-12.
PMID: 3041020 [PubMed - indexed for MEDLINE]
56:  Salter DW, Smith EJ, Hughes SH, Wright SE, Crittenden LB.Related Articles
Transgenic chickens: insertion of retroviral genes into the chicken germ line.
Virology. 1987 Mar;157(1):236-40.
PMID: 3029962 [PubMed - indexed for MEDLINE]
57:  Hughes SH, Kosik E, Fadly AM, Salter DW, Crittenden LB.Related Articles
Design of retroviral vectors for the insertion of foreign deoxyribonucleic acid
sequences into the avian germ line.
Poult Sci. 1986 Aug;65(8):1459-67.
PMID: 3035527 [PubMed - indexed for MEDLINE]
58:  Salter DW, Smith EJ, Hughes SH, Wright SE, Fadly AM, Witter RL, Crittenden LB.Related Articles
Gene insertion into the chicken germ line by retroviruses.
Poult Sci. 1986 Aug;65(8):1445-58.
PMID: 3035526 [PubMed - indexed for MEDLINE]
59:  Hughes S, Mellstrom K, Kosik E, Tamanoi F, Brugge J.Related Articles, Protein, Nucleotide
Mutation of a termination codon affects src initiation.
Mol Cell Biol. 1984 Sep;4(9):1738-46.
PMID: 6092936 [PubMed - indexed for MEDLINE]
60:  Hughes S, Kosik E.Related Articles, Nucleotide
Mutagenesis of the region between env and src of the SR-A strain of
Rous sarcoma virus for the purpose of constructing helper-independent
vectors.
Virology. 1984 Jul 15;136(1):89-99.
PMID: 6330999 [PubMed - indexed for MEDLINE]
61:  Sorge J, Ricci W, Hughes SH.Related Articles, Nucleotide
cis-Acting RNA packaging locus in the 115-nucleotide direct repeat
of Rous sarcoma virus.
J Virol. 1983 Dec;48(3):667-75.
PMID: 6313966 [PubMed - indexed for MEDLINE]
62:  Sorge J, Hughes SH.Related Articles
Polypurine tract adjacent to the U3 region of the Rous sarcoma virus genome
provides a cis-acting function.
J Virol. 1982 Aug;43(2):482-8.
PMID: 6180180 [PubMed - indexed for MEDLINE]
63:  Sorge J, Hughes SH.Related Articles
Splicing of intervening sequences introduced into an infectious retroviral vector.
J Mol Appl Genet. 1982;1(6):547-59.
PMID: 6296256 [PubMed - indexed for MEDLINE]




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